DUNE LAr Software Releases
Contents
Introduction
This page describes recent releases of DUNE software for simulation and reconstruction of event data from the LAr TPCs and associated photon and muon detectors. The software is released in the dunetpc package. Earlier releases in the lbnecode package are described on this other page.
Finding and downloading DUNE releases
Releases of dunetpc (and other DUNE products) are installed at FNAL at
/grid/fermiapp/products/dune
and on CVMFS at
/cvmfs/dune.opensciencegrid.org/products/dune
A release and all its dependencies may be installed on any machine using the pullProducts command:
./pullProducts ~/ups slf6 dune-v04_21_00 e7 prof
The first three arguments are the directory where the products are to be installed, the OS specifier and the product name and version. The last two are the UPS qualifiers. The last is the compiler option (prof is nearly optimized but retains the code line numbers) and the first is a colon-separated list of all other qualifiers (e.g. e7:s15, not e7-s15). The available OS and qualifiers for a given release may be deduced from the list of manifests found in the manifest directory for the desired dune release in the dune bundle listing.
Tar files for individual product versions (including dunetpc) may also be downloaded directly from the SciSoft product area. To install a product, simply untar these in the local products area, e.g.
cd ~/ups
tar xf ~/Downloads/lbnecode-04.20.00-slf6-x86_64-e7-prof.tar.bz2
Using DUNE releases
Scripts to set up the FNAL and CVMFS releases are provided. To set up to use release 4.21 from the FNAL installation:
source /grid/fermiapp/products/dune/setup_dune.sh
setup dunetpc v04_21_00 -q e7:prof
To use the CVMFS installation of the same release:
source /cvmfs/dune.opensciencegrid.org/products/dune/setup_dune.sh
setup dunetpc v04_21_00 -q e7:prof
For local installation of all products in ~/ups, set up with something like the following:
source ~/ups/setups
setup git
setup gitflow
setup mrb
setup dunetpc v04_21_00 -q e7:prof
In all cases, the ups command can be used to find out xhich versions of dunetpc are available:
Use the ups list command to list available versions and qualifiers for dunetpc, e.g.
fnal:lbne> ups list -aK+ dunetpc
"dunetpc" "v04_20_00" "Linux64bit+2.6-2.12" "e7:prof" ""
"dunetpc" "v04_20_00" "Linux64bit+2.6-2.12" "debug:e7" ""
"dunetpc" "v04_21_00" "Linux64bit+2.6-2.12" "e7:prof" ""
"dunetpc" "v04_21_00" "Linux64bit+2.6-2.12" "debug:e7" ""
Building and installing dune releases
Build and installation instruction may be found on the Redmine CVMFS page. In particular, this page has the instructions for synchronizing the CVMFS releases with those in the FNAL grid area.
The code I (D. Adams) use to build releases is dune-larrel. See README.md in that package or use "larrel -H" for instructions. The product of the build is a tar file and manifest for each dune release combination of OS, version, qualifier, etc.
To install in FNAL grid area:
ssh dune@lbnegpvm03.fnal.gov
cd /grid/fermiapp/products/dune
tar xf /afs/fnal.gov/files/home/room1/dladams/reltars/dunecode-04.20.00-slf6-x86_64-e7-prof.tar.bz2
To synchronize the CVMFS area with the grid area:
get-cert
voms-proxy-init -noregen -voms lbne:/lbne/Role=Analysis
ssh -l cvmfsdune oasiscfs02.fnal.gov
dune-sync dune/dunetpc
Replace dunetpc with dune_pardata, duneutil or lbne_raw_data to update any of those products. The script dune-sync is installed on the oasis server and may also be found at https://github.com/dladams/dune-larrel/blob/master/dune-sync.
Each synchronization generates a log in $HOME/logs and a CVMFS server tag. Periodically remove these.
The tags may be listed with
cvmfs_server tag dune.opensciencegrid.org
and tags removed with
cvmfs_server tag -r TAG dune.opensciencegrid.org
To copy a tar file to SciSoft and install the corresponding manifest:
copyToSciSoft /afs/fnal.gov/files/home/room1/dladams/reltars/dunecode-04.20.00-slf6-x86_64-e6-prof.tar.bz2
copyToSciSoft workdir/manifests/dune-04.21.00-Linux64bit+2.6-2.12-e7-prof_MANIFEST.txt
The command script may be found at /afs/fnal.gov/files/home/room1/dladams/bin/copyToSciSoft or http://scisoft.fnal.gov/scisoft/bundles/tools/copyToSciSoft.
In case of error, log in to scisoftportal.fnal.gov and (very carefully) remove invalid files from /nasroot/SciSoft/bundles/....
More information
Instructions for running and building lbnecode and larsoft at FNAL using mrb, git, etc. my be found here.
A package intended to simplify these procedure and allow running and development at other sites is lbne-dev.
The DUNE LArSoft-based SW lbnecode may be downloaded from on SciSoft. It may browsed using Redmine.
LArSoft is documented on the LArSoft wiki. See the Getting LArSoft link on that page for instructions on downloading LArSoft from scisoft or accessing it via CVMFS. For issues, follow the menu links "Issues" or "New issue" on the LArSoft Redmine page. Questions about LArSoft may be directed to the LArSoft mailing list.
Art code may be browsed with Redmine or LXR. Also, see the art workbook.
The art instructions for cmake are described in redmine. Upd-to-date instructions may be found at the top of $ART_DIR/Modules/ArtMake.cmake and friends
The qualifiers used to specify compilers and other products are described here.
Here are tagging instructions for uBooNE
LBNE 35-ton Data Model and Reconstruction
LBNE code repositories and their browsers
Many files are needed to create a new package. The mrb newProduct command can be used to create the skeleton for a new package. See the mrb reference guide.
Units are cm and ns (Tom, January 2015).
LBNE jobs may be submitted using the package lbneutil described in a talk by Tingjun.
LBNE geometries are summarized here.
The reconstruction used in the 35-ton simulation is specified in lbnecode/source/fcl/lbne35t/reco/standard_reco_lbne35t.fcl.
The 35-ton MC data samples are described here.
For information about the GENIE event generator, see the 2015 users's manual (2010 user's manual) and the developer's manual.
